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AT1G24380 AT1G24380 AT5G59190 AT5G59190 AT3G25270 AT3G25270 AT1G03510 AT1G03510 AT5G44730 AT5G44730 AT5G59260 AT5G59260 AT1G16630 AT1G16630 AT1G65570 AT1G65570 AT1G27120 AT1G27120 AT3G47400 AT3G47400 PE11 PE11
"AT1G65570" - Pectin lyase-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
AT1G65570Pectin lyase-like protein (397 aa)    
Predicted Functional Partners:
AT5G59260
Concanavalin A-like lectin kinase-like protein (674 aa)
           
  0.866
AT5G59190
Subtilase family protein (693 aa)
           
  0.866
AT1G24380
Uncharacterized protein (293 aa)
           
  0.866
AT1G03510
Pentatricopeptide repeat-containing protein (429 aa)
           
  0.865
AT1G16630
Uncharacterized protein (845 aa)
           
  0.860
AT3G25270
Ribonuclease H-like protein (343 aa)
           
  0.843
AT3G47400
Pectinesterase 33; Acts in the modification of cell walls via demethylesterification of cell wall pectin (594 aa)
   
 
  0.832
PE11
Pectinesterase 11; Acts in the modification of cell walls via demethylesterification of cell wall pectin (352 aa)
   
 
  0.832
AT1G27120
Galactosyltransferase family protein; Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. Utilizes UDP-galactose solely as sugar donor. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth (673 aa)
           
  0.809
AT5G44730
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (255 aa)
           
  0.739
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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