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scpl42 scpl42 AT1G73120 AT1G73120 scpl1 scpl1 ATL15 ATL15 scpl41 scpl41 AT1G66180 AT1G66180 scpl47 scpl47 SCPL34 SCPL34 EIF3E EIF3E EIF3C EIF3C AT5G22960 AT5G22960
"AT1G66180" - Aspartyl protease-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G66180Aspartyl protease-like protein (430 aa)    
Predicted Functional Partners:
AT1G73120
Uncharacterized protein (109 aa)
           
  0.675
ATL15
E3 ubiquitin-protein ligase ATL15; E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8, UBC10, UBC11, UBC28 and UBC29 in vitro (381 aa)
           
  0.670
EIF3C
Eukaryotic translation initiation factor 3C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (900 aa)
           
  0.631
EIF3E
Eukaryotic translation initiation factor 3E; Essential protein (PubMed-18067529, PubMed-20444226). Component of the eukaryotic translation initiation factor 3 (eIF- 3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (Potential). Regulates negatively translation during flower development (PubMed-18067529) (441 aa)
           
  0.601
scpl42
Serine carboxypeptidase-like 42; Probable carboxypeptidase (473 aa)
     
 
  0.477
scpl41
Serine carboxypeptidase-like 41; Probable carboxypeptidase (469 aa)
     
 
  0.477
scpl1
Serine carboxypeptidase-like 1; Probable carboxypeptidase (441 aa)
     
 
  0.477
SCPL34
Carboxypeptidase D; Probable carboxypeptidase (499 aa)
     
 
  0.477
scpl47
Carboxypeptidase; Probable carboxypeptidase (505 aa)
     
 
  0.477
AT5G22960
Putative serine carboxypeptidase-like 54 (190 aa)
     
 
  0.477
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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