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AT2G14710 AT2G14710 SKIP1 SKIP1 AT3G24700 AT3G24700 AFB5 AFB5 AT5G51000 AT5G51000 AT5G60560 AT5G60560 AT1G66490 AT1G66490 AT1G58090 AT1G58090 AT3G17570 AT3G17570 FOA1 FOA1 AT3G16580 AT3G16580
"AT1G66490" - F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G66490F-box protein (360 aa)    
Predicted Functional Partners:
AT3G16580
F-box/kelch-repeat protein (382 aa)
     
 
 
0.564
AT3G24700
F-box and associated interaction domain-containing protein (249 aa)
     
 
 
0.563
FOA1
F-box protein (409 aa)
     
 
 
0.562
AT2G14710
F-box protein (362 aa)
     
 
 
0.559
AT1G58090
Putative F-box protein (371 aa)
     
 
 
0.554
AT3G17570
Putative F-box/kelch-repeat protein (381 aa)
     
 
 
0.551
AT5G60560
F-box and associated interaction domain-containing protein (374 aa)
         
 
0.540
SKIP1
F-box protein SKIP1; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (300 aa)
         
    0.540
AT5G51000
Putative F-box protein (378 aa)
         
 
0.540
AFB5
Auxin F-box protein 5 (619 aa)
         
    0.540
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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