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AT1G70590 AT1G70590 AT5G02700 AT5G02700 AT4G11590 AT4G11590 AT1G27490 AT1G27490 AT3G49030 AT3G49030 AT3G16740 AT3G16740 AT1G67340 AT1G67340 AT3G28410 AT3G28410 AT5G27495 AT5G27495 AT4G08910 AT4G08910 MCM9 MCM9
"AT1G67340" - HCP-like superfamily protein with MYND-type zinc finger in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G67340HCP-like superfamily protein with MYND-type zinc finger; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (379 aa)    
Predicted Functional Partners:
AT4G08910
Uncharacterized protein (212 aa)
           
  0.923
MCM9
Minichromosome maintenance 9; Probable DNA helicase that may play a role in DNA repair during meiosis (646 aa)
           
  0.912
AT5G27495
Defensin-like protein 113 (80 aa)
           
  0.880
AT4G11590
F-box protein; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (397 aa)
           
  0.862
AT3G49030
Putative F-box/FBD/LRR-repeat protein (443 aa)
           
  0.862
AT3G28410
F-box domain-containing protein (465 aa)
           
  0.862
AT1G70590
F-box protein (351 aa)
           
  0.862
AT1G27490
F-box and associated interaction domain-containing protein (164 aa)
           
  0.862
AT5G02700
Putative F-box/LRR-repeat protein (456 aa)
           
  0.740
AT3G16740
F-box/kelch-repeat protein; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (391 aa)
           
  0.740
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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