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HAC5 HAC5 Hsp89.1 Hsp89.1 AT-HSFA5 AT-HSFA5 HAC2 HAC2 HAC4 HAC4 Hsp81.4 Hsp81.4 AT3G12050 AT3G12050 AT1G16705 AT1G16705 AT1G67360 AT1G67360 AT3G07090 AT3G07090 NF-YC2 NF-YC2
"AT1G67360" - Rubber elongation factor protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G67360Rubber elongation factor protein (REF) (240 aa)    
Predicted Functional Partners:
AT1G16705
p300/CBP acetyltransferase-related protein (129 aa)
           
  0.960
AT3G12050
Aha1 domain-containing protein (360 aa)
     
   
  0.740
HAC4
Histone acetyltransferase of the CBP family 4; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation (1456 aa)
           
  0.730
HAC2
E1A/CREB-binding protein; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation (By similarity). No acetyltransferase activity found in vitro (1367 aa)
           
  0.676
AT3G07090
PPPDE putative thiol peptidase family protein (265 aa)
     
        0.645
AT-HSFA5
Heat stress transcription factor A-5; Transcriptional activator that specifically binds DNA sequence 5’-AGAAnnTTCT-3’ known as heat shock promoter elements (HSE) (466 aa)
           
  0.600
Hsp81.4
HEAT SHOCK PROTEIN 81.4; Molecular chaperone which stabilizes unfolding protein intermediates and functions as a folding molecular chaperone that assists the non-covalent folding of proteins in an ATP-dependent manner (699 aa)
     
   
  0.585
NF-YC2
Nuclear factor Y, subunit C2; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (199 aa)
     
        0.571
Hsp89.1
HEAT SHOCK PROTEIN 89.1; Molecular chaperone which stabilizes unfolding protein intermediates and functions as a folding molecular chaperone that assists the non-covalent folding of proteins in an ATP-dependent manner (799 aa)
           
  0.558
HAC5
Histone acetyltransferase HAC5; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation (1670 aa)
           
  0.553
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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