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AT1G67450 AT1G67450 AT4G10190 AT4G10190 AT3G22421 AT3G22421 AT3G42830 AT3G42830 AT3G59610 AT3G59610 AT5G41720 AT5G41720 AT1G12190 AT1G12190 AT1G12170 AT1G12170 AT3G21410 AT3G21410 AT3G20030 AT3G20030 SK16 SK16
"AT1G67450" - Putative F-box protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
AT1G67450Putative F-box protein (398 aa)    
Predicted Functional Partners:
AT5G41720
Uncharacterized protein (187 aa)
     
 
    0.730
AT4G10190
F-box and associated interaction domains-containing protein (367 aa)
     
 
 
0.730
AT3G59610
F-box/kelch-repeat protein (521 aa)
     
 
 
0.730
AT3G42830
RING-box protein 1; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF complex plays a crucial role in regulating response to auxin and is essential for growth and development. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme, to the complex and brings it into close proximity to the substrate (By similarity) (115 aa)
     
 
    0.730
AT3G22421
F-box and associated interaction domain-containing protein (426 aa)
     
 
 
0.730
AT3G21410
F-box/WD-40 repeat-containing protein 1 (410 aa)
     
 
 
0.730
AT3G20030
Putative F-box protein (402 aa)
     
 
 
0.730
SK16
SKP1-like 16; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (170 aa)
     
 
    0.730
AT1G12190
F-box and associated interaction domain-containing protein (375 aa)
     
 
 
0.730
AT1G12170
F-box family protein (364 aa)
     
 
 
0.730
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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