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AT5G49500 AT5G49500 AT3G49100 AT3G49100 AT1G48900 AT1G48900 AT1G48160 AT1G48160 AT2G43640 AT2G43640 AT5G61970 AT5G61970 AT1G67680 AT1G67680 AT4G25730 AT4G25730 ATHSRP54A ATHSRP54A NSN1 NSN1 AT5G44565 AT5G44565
"AT1G67680" - SRP72 RNA-binding domain in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G67680SRP72 RNA-binding domain; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (664 aa)    
Predicted Functional Partners:
AT5G61970
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (605 aa)
     
  0.999
AT1G48160
Signal recognition particle subunit SRP19; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (145 aa)
     
  0.998
AT2G43640
Signal recognition particle subunit SRP14; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity) (121 aa)
       
  0.997
AT1G48900
Signal recognition particle subunit SRP54; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (495 aa)
     
  0.987
AT5G44565
Uncharacterized protein (73 aa)
           
  0.987
ATHSRP54A
Signal recognition particle protein 1; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (479 aa)
     
  0.982
AT5G49500
Signal recognition particle SRP54 subunit protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (497 aa)
     
  0.981
AT3G49100
Signal recognition particle subunit SRP9; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity) (103 aa)
     
 
  0.949
NSN1
Nucleostemin-like 1; Involved in the differentiation of epidermal cells, probably via the regulation of the expression of meristem-related genes (e.g. CLV3, STM, KNAT1, CUC2 and AG) and of leaf polarity- related genes (e.g. YAB5, FIL, AS2, PHB and PHV) (PubMed-22058024, PubMed-22357616). May play a role in regulating cellular proliferation (By similarity). Necessary for flower development, probably by preventing apical dominance through the down- regulation of AG expression (PubMed-22357616). Required for embryogenesis, leaf and cotyledon development, as well as for leaf polarity estab [...] (582 aa)
     
      0.924
AT4G25730
FtsJ-like methyltransferase family protein; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (821 aa)
     
      0.922
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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