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STRINGSTRING
AT5G10695 AT5G10695 CNI1 CNI1 S6K2 S6K2 AT1G05340 AT1G05340 AT1G13340 AT1G13340 AT1G19020 AT1G19020 AT1G67920 AT1G67920 ZAC ZAC MIR162A MIR162A AT1G67930 AT1G67930 NPC2 NPC2
"AT1G67920" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G67920Uncharacterized protein (67 aa)    
Predicted Functional Partners:
AT1G67930
Golgi transport complex protein-related (832 aa)
           
  0.923
NPC2
Phospholipase C (514 aa)
           
  0.707
ZAC
ADP-ribosylation factor GTPase-activating protein AGD12; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Binds phosphatidylinositol 3-monophosohate (PI-3-P) and anionic phospholipids (337 aa)
           
  0.638
MIR162A
microRNA162A (76 aa)
           
  0.637
AT5G10695
Uncharacterized protein (67 aa)
     
        0.441
S6K2
Serine/threonine protein kinase 2; Downstream effector of TOR signaling pathway. May be involved in adaptation of plant to cold or high-salt conditions (471 aa)
     
        0.439
AT1G13340
Regulator of Vps4 activity in the MVB pathway protein (409 aa)
     
        0.438
CNI1
Carbon/nitrogen insensitive 1; E3 ubiquitin-protein ligase that is required for the plant C/N response during seedling growth transition. May be involved in the early steps of the plant defense signaling pathway (368 aa)
     
        0.419
AT1G05340
Uncharacterized protein (72 aa)
     
        0.414
AT1G19020
Uncharacterized protein (86 aa)
     
        0.403
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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