Full Link:
STRINGSTRING
AT5G05250 AT5G05250 AT3G13610 AT3G13610 AT1G47400 AT1G47400 AT3G45940 AT3G45940 AT1G12030 AT1G12030 AT3G61930 AT3G61930 AT1G68650 AT1G68650 AT5G38820 AT5G38820 FXG1 FXG1 AT2G36885 AT2G36885 AT2G42750 AT2G42750
"AT1G68650" - UPF0016 protein 5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G68650UPF0016 protein 5 (228 aa)    
Predicted Functional Partners:
AT1G12030
Uncharacterized protein (295 aa)
           
  0.737
AT3G61930
Uncharacterized protein (109 aa)
           
  0.705
AT2G36885
Uncharacterized protein (256 aa)
     
   
  0.687
AT3G45940
Alpha-glucosidase (868 aa)
           
  0.670
AT3G13610
Oxidoreductase, 2OG-Fe(II) oxygenase family protein; 2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6’-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA (361 aa)
           
  0.636
AT1G47400
Uncharacterized protein (50 aa)
           
  0.636
AT5G38820
Encodes a putative amino acid transporter (456 aa)
           
  0.635
AT2G42750
DNAJ heat shock N-terminal domain-containing protein (344 aa)
           
  0.633
FXG1
Alpha-fucosidase 1; Hydrolyzes alpha-1,2-linked fucose. Also active on fucosylated xyloglucan oligosaccharides (372 aa)
           
  0.605
AT5G05250
Uncharacterized protein (239 aa)
           
  0.603
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (1%)