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STRINGSTRING
PMDH1 PMDH1 c-NAD-MDH3 c-NAD-MDH3 PMDH2 PMDH2 c-NAD-MDH2 c-NAD-MDH2 AT5G58330 AT5G58330 PPC4 PPC4 GLT1 GLT1 mMDH1 mMDH1 GLU1 GLU1 MDH MDH GLU2 GLU2
"PPC4" - Phosphoenolpyruvate carboxylase 4 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
PPC4Phosphoenolpyruvate carboxylase 4; Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (1032 aa)    
Predicted Functional Partners:
GLT1
Glutamate synthase 1 [NADH]; Involved in glutamate biosynthesis. Required for non- photorespiratory ammonium assimilation. Probably involved in primary ammonium assimilation in roots (2208 aa)
     
 
  0.978
GLU1
Glutamate synthase 1; Involved in glutamate biosynthesis in leaf. Required for the reassimilation of ammonium ions generated during photorespiration (1648 aa)
     
   
  0.970
GLU2
Glutamate synthase 2; May play a role in primary nitrogen assimilation in roots. Could supply a constitutive level of glutamate to maintain a basal level of protein synthesis (1629 aa)
     
   
  0.970
AT5G58330
Lactate/malate dehydrogenase family protein (443 aa)
         
  0.964
c-NAD-MDH3
Malate dehydrogenase (339 aa)
         
  0.964
c-NAD-MDH2
Malate dehydrogenase (332 aa)
         
  0.964
PMDH2
Malate dehydrogenase (363 aa)
         
  0.964
MDH
Malate dehydrogenase (403 aa)
         
  0.964
PMDH1
Malate dehydrogenase (354 aa)
         
  0.964
mMDH1
Malate dehydrogenase 1 (341 aa)
         
  0.964
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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