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AT5G46450 AT5G46450 AT1G51550 AT1G51550 AT4G23440 AT4G23440 AT3G21920 AT3G21920 AT1G69170 AT1G69170 GAI GAI MYB6 MYB6 HR3 HR3 WRKY45 WRKY45 T21F11.18 T21F11.18 ZAP1 ZAP1
"AT1G69170" - Squamosa promoter-binding-like protein 6 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G69170Squamosa promoter-binding-like protein 6; Trans-acting factor that binds specifically to the consensus nucleotide sequence 5’-TNCGTACAA-3’ (405 aa)    
Predicted Functional Partners:
T21F11.18
TOPLESS-related 1; Transcriptional corepressor. Activates TIR-NB-LRR R protein-mediated immune responses through repression of negative regulators such as CNGC2/DND1 (PubMed-20647385). Negative regulator of jasmonate responses (By similarity) (1120 aa)
           
  0.636
HR3
Homolog of RPW8; Probable disease resistance (R) protein (213 aa)
           
  0.606
MYB6
Myb domain protein 6 (236 aa)
           
  0.556
GAI
DELLA protein GAI; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA- inducible genes. Positively regulates XERICO expression. In contrast to RGA, it is less sensitive to GA. Its activity is probably regulated by other phytohormones such as auxin and ethylene (533 aa)
       
      0.550
AT4G23440
Disease resistance protein (TIR-NBS class) (964 aa)
           
  0.506
WRKY45
WRKY DNA-binding protein 45; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (147 aa)
           
  0.489
AT1G51550
F-box/kelch-repeat protein (478 aa)
           
  0.477
AT5G46450
TIR-NBS-LRR class disease resistance protein (1123 aa)
           
  0.472
ZAP1
WRKY transcription factor 1; Transcription factor. Binds to a 5’-CGTTGACCGAG-3’ consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element (487 aa)
     
   
  0.463
AT3G21920
Domain of unknown function (DUF26) (278 aa)
           
  0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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