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NLP7 NLP7 IWS1 IWS1 VIP5 VIP5 GTB1 GTB1 CUL4 CUL4 AT1G69660 AT1G69660 AT4G12100 AT4G12100 IWS2 IWS2 COBL7 COBL7 AT3G46910 AT3G46910 STP6 STP6
"AT1G69660" - TRAF-like family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
AT1G69660TRAF-like family protein (231 aa)    
Predicted Functional Partners:
IWS2
Transcription elongation factor (TFIIS) family protein (406 aa)
           
  0.866
GTB1
Global transcription factor group B1 (1647 aa)
           
  0.677
CUL4
Cullin4; Component of the CUL4-RBX1-CDD (COP10-DDB1a-DET1) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Participates in the CDD complex to light-mediated control of development. May repress photomorphogenesis through enhancing COP1 E3 ubiquitin-protein ligase activity. Acts together with the CUL4- DDB1-COP1-SPA E3 ubiquitin-protein ligase complexes in the repression of photomorphogenesis and flowering time. Component ot the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protein ligase complex which mediates ubiquitin [...] (792 aa)
     
 
  0.674
AT4G12100
Cullin family protein (434 aa)
     
 
  0.674
AT3G46910
Cullin family protein (247 aa)
     
 
  0.674
COBL7
COBRA-like protein 7 (661 aa)
           
  0.670
IWS1
Transcription elongation factor (TFIIS) family protein (502 aa)
           
  0.636
NLP7
NIN like protein 7; Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal (959 aa)
           
  0.603
STP6
Sugar transporter 6; Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Can transport glucose, 3-O-methylglucose, mannose, fructose and galactose, and, to a lower extent, xylose and ribulose (507 aa)
           
  0.592
VIP5
Vernalization independence 5; Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 ’Lys-4’ (H3K4me3) (PubMed-20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressors and FLC and MADS-box genes of the MAF family (PubMed-15472079). Involved in the control of seed dormancy and germination (PubMed-21799800) (643 aa)
     
   
  0.568
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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