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LNG2 LNG2 AT5G15880 AT5G15880 F4L23.1 F4L23.1 LNG1 LNG1 ROT3 ROT3 ATHB13 ATHB13 AT1G69980 AT1G69980 TBP2 TBP2 TFIIB TFIIB AT5G62440 AT5G62440 AT1G70250 AT1G70250
"ATHB13" - Homeobox-leucine zipper protein ATHB-13 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
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[Homology]
Score
ATHB13Homeobox-leucine zipper protein ATHB-13; Probable transcription factor that may act in the sucrose-signaling pathway (294 aa)    
Predicted Functional Partners:
TFIIB
Transcription factor IIB; General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II (312 aa)
       
 
  0.682
AT5G15880
Uncharacterized protein (348 aa)
           
  0.677
AT5G62440
Uncharacterized protein (202 aa)
           
  0.670
AT1G69980
Uncharacterized protein (205 aa)
           
  0.670
TBP2
TATA binding protein 2; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre- initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II (200 aa)
       
      0.641
LNG1
LONGIFOLIA1; In association with LNG2, regulates leaf morphology by promoting longitudinal polar cell elongation independently of ROT3 (927 aa)
           
  0.631
LNG2
LONGIFOLIA2; In association with LNG1, regulates leaf morphology by promoting longitudinal polar cell elongation independently of ROT3. Associates with microtubules and recruits TON1A and TON1B to the cytoskeleton through its C-terminus (905 aa)
     
   
  0.612
F4L23.1
Growth-regulating factor 9; Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation (429 aa)
           
  0.608
ROT3
ROTUNDIFOLIA 3; C-23 hydroxylase involved in brassinosteroids biosynthesis. Converts directly (22S,24R)-22-hydroxy-5-alpha- ergostan-3-one and 3-epi-6-deoxocathasterone to 3-dehydro-6- deoxoteasterone and 6-deoxotyphasterol. These C-23 hydroxylation shortcuts bypass campestanol, 6-deoxocathasterone, and 6- deoxoteasterone. Functionally redundant with CYP90D1 (524 aa)
           
  0.605
AT1G70250
Putative receptor serine/threonine kinase (799 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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