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AT1G69900 AT1G69900 AT5G47150 AT5G47150 SK10 SK10 AT5G03370 AT5G03370 AT3G22810 AT3G22810 AT5G63740 AT5G63740 AT1G60410 AT1G60410 AT1G08050 AT1G08050 SK7 SK7 AT2G36560 AT2G36560 AT2G21930 AT2G21930
"AT1G69900" - Actin cross-linking protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G69900Actin cross-linking protein (397 aa)    
Predicted Functional Partners:
AT5G47150
YDG/SRA domain-containing protein (328 aa)
           
  0.670
AT5G03370
Acylphosphatase (171 aa)
           
  0.670
AT3G22810
Uncharacterized protein (472 aa)
           
  0.670
AT2G21930
F-box protein (335 aa)
           
  0.670
AT1G60410
F-box family protein (406 aa)
           
  0.670
AT1G08050
C3HC4-type RING finger-containing protein (641 aa)
           
  0.670
AT5G63740
Zinc finger-related protein (226 aa)
           
  0.638
AT2G36560
A paternally expressed imprinted gene (574 aa)
           
  0.637
SK7
SKP1-like 7; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (125 aa)
           
  0.636
SK10
SKP1-like 10; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (152 aa)
           
  0.635
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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