Full Link:
STRINGSTRING
AT2G02720 AT2G02720 AT5G15110 AT5G15110 AT5G14650 AT5G14650 AT5G17200 AT5G17200 PPME1 PPME1 ADPG1 ADPG1 PGA4 PGA4 AT3G59850 AT3G59850 AT3G15720 AT3G15720 AT3G07850 AT3G07850 AT3G01270 AT3G01270
"PPME1" - Pectinesterase PPME1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPME1Pectinesterase PPME1; Acts in the modification of cell walls via demethylesterification of cell wall pectin. Involved in the pollen tube growth and determination of pollen tube morphology (361 aa)    
Predicted Functional Partners:
PGA4
Polygalacturonase 4; May function in depolymerizing pectin during pollen development, germination, and tube growth. Acts as an exo- polygalacturonase (422 aa)
   
 
  0.985
AT3G07850
Galacturan 1,4-alpha-galacturonidase; May function in depolymerizing pectin during pollen development, germination, and tube growth. Acts as an exo- polygalacturonase (444 aa)
   
 
  0.984
AT5G17200
Polygalacturonase (421 aa)
       
  0.982
AT5G14650
Polygalacturonase (435 aa)
       
  0.970
AT3G59850
Polygalacturonase (388 aa)
       
  0.970
ADPG1
Polygalacturonase ADPG1; Polygalacturonase involved in cell separation in the final stages of pod shatter and in anther dehiscence. Not involved in floral organ abscission (431 aa)
       
  0.970
AT3G15720
Polygalacturonase (456 aa)
       
  0.970
AT5G15110
Putative pectate lyase 19 (472 aa)
   
 
  0.953
AT2G02720
Putative pectate lyase 6 (455 aa)
   
 
  0.951
AT3G01270
Putative pectate lyase 7 (475 aa)
   
 
  0.947
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (2%)