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STRINGSTRING
Solyc08g066820.2.1 Solyc08g066820.2.1 LOC543838 LOC543838 Solyc08g005990.2.1 Solyc08g005990.2.1 Solyc04g072020.2.1 Solyc04g072020.2.1 Solyc10g074700.1.1 Solyc10g074700.1.1 Solyc07g009490.2.1 Solyc07g009490.2.1 Solyc02g068430.2.1 Solyc02g068430.2.1 Solyc05g046300.2.1 Solyc05g046300.2.1 Solyc02g069750.1.1 Solyc02g069750.1.1 Solyc00g059500.1.1 Solyc00g059500.1.1 Solyc05g006080.1.1 Solyc05g006080.1.1
"Solyc00g059500.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g059500.1.1Annotation not available (96 aa)    
Predicted Functional Partners:
Solyc02g068430.2.1
Uncharacterized protein (309 aa)
     
 
  0.615
Solyc10g074700.1.1
Uncharacterized protein (413 aa)
     
 
  0.602
Solyc07g009490.2.1
Uncharacterized protein (429 aa)
     
 
  0.602
Solyc05g046300.2.1
Uncharacterized protein (427 aa)
     
 
  0.602
Solyc05g006080.1.1
Uncharacterized protein (178 aa)
       
      0.558
Solyc08g066820.2.1
Uncharacterized protein (372 aa)
     
   
  0.481
LOC543838
Phosphatidylserine decarboxylase (445 aa)
           
  0.477
Solyc08g005990.2.1
Uncharacterized protein (223 aa)
     
   
  0.465
Solyc04g072020.2.1
Uncharacterized protein (365 aa)
     
   
  0.444
Solyc02g069750.1.1
Uncharacterized protein (473 aa)
     
   
  0.444
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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