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Solyc08g008160.2.1 Solyc08g008160.2.1 Solyc02g032920.2.1 Solyc02g032920.2.1 Solyc10g074560.1.1 Solyc10g074560.1.1 Solyc03g112820.2.1 Solyc03g112820.2.1 Solyc03g097160.2.1 Solyc03g097160.2.1 Solyc03g120080.2.1 Solyc03g120080.2.1 Solyc05g010480.2.1 Solyc05g010480.2.1 Solyc02g069770.2.1 Solyc02g069770.2.1 Solyc01g007250.2.1 Solyc01g007250.2.1 Solyc01g087670.2.1 Solyc01g087670.2.1 Solyc02g089280.2.1 Solyc02g089280.2.1
"Solyc01g007250.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g007250.2.1Uncharacterized protein (293 aa)    
Predicted Functional Partners:
Solyc02g089280.2.1
Uncharacterized protein (182 aa)
     
  0.998
Solyc02g069770.2.1
Uncharacterized protein (516 aa)
     
  0.997
Solyc08g008160.2.1
Uncharacterized protein (415 aa)
     
      0.994
Solyc03g120080.2.1
Uncharacterized protein (666 aa)
     
  0.994
Solyc02g032920.2.1
Uncharacterized protein (652 aa)
     
  0.994
Solyc03g112820.2.1
U3 small nucleolar ribonucleoprotein protein MPP10 ; Involved in nucleolar processing of pre-18S ribosomal RNA (552 aa)
     
  0.993
Solyc10g074560.1.1
Uncharacterized protein (608 aa)
     
  0.991
Solyc03g097160.2.1
Uncharacterized protein (871 aa)
     
  0.991
Solyc05g010480.2.1
Uncharacterized protein (396 aa)
     
    0.990
Solyc01g087670.2.1
Uncharacterized protein (907 aa)
     
  0.990
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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