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accD accD Solyc04g039820.1.1 Solyc04g039820.1.1 Solyc09g013080.2.1 Solyc09g013080.2.1 Solyc12g056940.1.1 Solyc12g056940.1.1 Solyc06g069530.2.1 Solyc06g069530.2.1 BCCP1 BCCP1 Solyc01g094340.2.1 Solyc01g094340.2.1 Solyc01g008330.2.1 Solyc01g008330.2.1 Solyc01g006980.2.1 Solyc01g006980.2.1 Solyc00g017930.1.1 Solyc00g017930.1.1 Solyc03g097470.2.1 Solyc03g097470.2.1
"Solyc01g008330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g008330.2.1Uncharacterized protein (536 aa)    
Predicted Functional Partners:
Solyc01g094340.2.1
Uncharacterized protein (725 aa)
 
  0.997
Solyc09g013080.2.1
Uncharacterized protein (761 aa)
 
  0.997
BCCP1
Biotin carboxylase carrier protein (285 aa)
 
  0.995
Solyc06g069530.2.1
Uncharacterized protein (261 aa)
 
  0.995
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
0.991
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic ; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (By similarity). Is up-regulated upon chromoplast differentiation, presumably for fatty acid biosynthesis (507 aa)
 
  0.985
Solyc04g039820.1.1
Uncharacterized protein (82 aa)
 
  0.981
Solyc00g017930.1.1
Annotation not available (250 aa)
 
  0.981
Solyc01g006980.2.1
Uncharacterized protein (359 aa)
   
  0.970
Solyc03g097470.2.1
Uncharacterized protein (431 aa)
   
 
  0.967
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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