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HY5 HY5 COP1 COP1 Solyc11g011980.1.1 Solyc11g011980.1.1 Solyc09g031610.2.1 Solyc09g031610.2.1 Det1 Det1 DDB1 DDB1 cul4 cul4 Solyc08g008120.2.1 Solyc08g008120.2.1 Solyc06g062940.2.1 Solyc06g062940.2.1 Solyc02g070460.2.1 Solyc02g070460.2.1 Solyc12g009120.1.1 Solyc12g009120.1.1
"Det1" - Light-mediated development protein DET1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Det1Light-mediated development protein DET1 ; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (523 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1 ; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (1095 aa)
       
 
  0.987
COP1
COP1 homolog (677 aa)
     
  0.982
cul4
Cullin 4 (785 aa)
       
  0.941
Solyc11g011980.1.1
Uncharacterized protein (672 aa)
     
  0.939
HY5
Transcription factor HY5 ; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
       
 
  0.927
Solyc08g008120.2.1
Uncharacterized protein (93 aa)
       
      0.897
Solyc09g031610.2.1
Uncharacterized protein (587 aa)
         
  0.886
Solyc12g009120.1.1
Uncharacterized protein (116 aa)
       
  0.825
Solyc06g062940.2.1
Uncharacterized protein (118 aa)
       
  0.825
Solyc02g070460.2.1
Uncharacterized protein (802 aa)
       
  0.814
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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