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Solyc02g088780.2.1 Solyc02g088780.2.1 Solyc08g076130.2.1 Solyc08g076130.2.1 Solyc08g065900.2.1 Solyc08g065900.2.1 Solyc01g079060.2.1 Solyc01g079060.2.1 Solyc01g111030.1.1 Solyc01g111030.1.1 Solyc11g070120.1.1 Solyc11g070120.1.1 Solyc05g026050.2.1 Solyc05g026050.2.1 Solyc11g066260.1.1 Solyc11g066260.1.1 Solyc11g006500.1.1 Solyc11g006500.1.1 Solyc05g055170.2.1 Solyc05g055170.2.1 Solyc07g064980.2.1 Solyc07g064980.2.1
"Solyc01g079060.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g079060.2.1Uncharacterized protein (210 aa)    
Predicted Functional Partners:
Solyc08g076130.2.1
Uncharacterized protein (179 aa)
         
  0.671
Solyc11g006500.1.1
Uncharacterized protein (232 aa)
     
 
  0.655
Solyc05g055170.2.1
Uncharacterized protein (234 aa)
     
 
  0.655
Solyc07g064980.2.1
Uncharacterized protein (416 aa)
         
  0.651
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
       
      0.602
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
       
      0.602
Solyc11g070120.1.1
Uncharacterized protein (218 aa)
     
  0.586
Solyc08g065900.2.1
Uncharacterized protein (252 aa)
     
  0.586
Solyc05g026050.2.1
Uncharacterized protein (218 aa)
     
  0.586
Solyc11g066260.1.1
Uncharacterized protein (220 aa)
     
  0.576
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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