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Solyc12g013630.1.1 Solyc12g013630.1.1 Solyc11g069260.1.1 Solyc11g069260.1.1 Solyc09g091660.2.1 Solyc09g091660.2.1 Solyc01g087500.2.1 Solyc01g087500.2.1 rps3 rps3 Solyc08g067620.2.1 Solyc08g067620.2.1 Solyc01g080300.2.1 Solyc01g080300.2.1 Solyc02g068180.2.1 Solyc02g068180.2.1 Solyc04g056540.2.1 Solyc04g056540.2.1
"Solyc01g080300.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g080300.2.1Uncharacterized protein (385 aa)    
Predicted Functional Partners:
Solyc11g069260.1.1
Uncharacterized protein (260 aa)
 
  0.976
Solyc02g068180.2.1
Uncharacterized protein (274 aa)
 
  0.971
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
     
   
  0.440
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
         
  0.435
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
           
  0.420
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
       
  0.417
Solyc09g091660.2.1
Uncharacterized protein (1440 aa)
       
  0.417
Solyc08g067620.2.1
Uncharacterized protein (1453 aa)
       
  0.417
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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