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Solyc02g011760.1.1 Solyc02g011760.1.1 Solyc11g006930.1.1 Solyc11g006930.1.1 Solyc11g013030.1.1 Solyc11g013030.1.1 Solyc01g081050.2.1 Solyc01g081050.2.1 Solyc11g012180.1.1 Solyc11g012180.1.1 Solyc00g050030.1.1 Solyc00g050030.1.1 Solyc09g009960.2.1 Solyc09g009960.2.1 Solyc09g010870.2.1 Solyc09g010870.2.1 Solyc02g082460.2.1 Solyc02g082460.2.1 Solyc04g055190.2.1 Solyc04g055190.2.1 Solyc06g054510.2.1 Solyc06g054510.2.1
"Solyc01g081050.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g081050.2.1Uncharacterized protein (1206 aa)    
Predicted Functional Partners:
Solyc11g006930.1.1
Uncharacterized protein (230 aa)
     
  0.897
Solyc09g009960.2.1
Uncharacterized protein (314 aa)
     
  0.897
Solyc02g011760.1.1
Uncharacterized protein (94 aa)
       
      0.872
Solyc00g050030.1.1
Annotation not available (702 aa)
   
 
  0.798
Solyc04g055190.2.1
Uncharacterized protein (521 aa)
   
   
  0.652
Solyc11g013030.1.1
DIS3-like exonuclease 2 ; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1092 aa)
     
 
  0.626
Solyc09g010870.2.1
Uncharacterized protein (793 aa)
     
 
  0.626
Solyc02g082460.2.1
Uncharacterized protein (935 aa)
     
 
  0.626
Solyc11g012180.1.1
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (133 aa)
   
 
  0.625
Solyc06g054510.2.1
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (136 aa)
   
 
  0.625
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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