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STRINGSTRING
Solyc01g097540.2.1 Solyc01g097540.2.1 Solyc07g053440.2.1 Solyc07g053440.2.1 Solyc12g087970.1.1 Solyc12g087970.1.1 Solyc01g097510.2.1 Solyc01g097510.2.1 Solyc01g097520.2.1 Solyc01g097520.2.1 Solyc04g076360.2.1 Solyc04g076360.2.1 Solyc03g097350.2.1 Solyc03g097350.2.1 AN35 AN35 AN34 AN34
"Solyc01g097520.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g097520.2.1Uncharacterized protein (316 aa)    
Predicted Functional Partners:
Solyc01g097540.2.1
Annexin (318 aa)
     
   
0.748
Solyc01g097510.2.1
Annexin (318 aa)
     
   
0.747
Solyc12g087970.1.1
Uncharacterized protein (569 aa)
       
      0.487
Solyc07g053440.2.1
Uncharacterized protein (749 aa)
       
      0.487
Solyc04g076360.2.1
Uncharacterized protein (571 aa)
       
      0.487
AN34
Annexin (314 aa)
       
 
0.443
AN35
Annexin (316 aa)
       
 
0.440
Solyc03g097350.2.1
Uncharacterized protein (949 aa)
       
 
  0.436
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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