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Solyc10g011770.2.1 Solyc10g011770.2.1 Solyc01g095430.2.1 Solyc01g095430.2.1 PSBP PSBP Solyc06g066620.2.1 Solyc06g066620.2.1 Solyc01g098640.2.1 Solyc01g098640.2.1 LOC544217 LOC544217 Solyc02g069460.2.1 Solyc02g069460.2.1 Solyc10g005050.2.1 Solyc10g005050.2.1 Solyc06g073260.2.1 Solyc06g073260.2.1 Solyc02g069450.2.1 Solyc02g069450.2.1 psbB psbB
"Solyc01g098640.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g098640.2.1Uncharacterized protein (289 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 chlorophyll apoprotein ; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (553 aa)
       
      0.890
Solyc02g069460.2.1
Uncharacterized protein (228 aa)
   
        0.681
Solyc02g069450.2.1
Uncharacterized protein (246 aa)
   
        0.677
Solyc06g066620.2.1
Uncharacterized protein (147 aa)
   
        0.677
Solyc01g095430.2.1
Uncharacterized protein (170 aa)
   
        0.663
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
        0.662
Solyc10g005050.2.1
Uncharacterized protein (180 aa)
   
        0.656
LOC544217
MRNA binding protein (407 aa)
   
        0.643
Solyc06g073260.2.1
Uncharacterized protein (379 aa)
   
        0.613
PSBP
Oxygen-evolving enhancer protein 2, chloroplastic ; May be involved in the regulation of photosystem II (258 aa)
   
   
  0.606
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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