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Solyc12g056420.1.1 Solyc12g056420.1.1 Solyc11g065890.1.1 Solyc11g065890.1.1 Solyc05g010440.1.1 Solyc05g010440.1.1 Solyc08g007860.2.1 Solyc08g007860.2.1 Solyc08g080340.2.1 Solyc08g080340.2.1 Solyc01g090940.2.1 Solyc01g090940.2.1 Solyc01g100020.2.1 Solyc01g100020.2.1 PSD2 PSD2 Solyc09g083330.2.1 Solyc09g083330.2.1 Solyc03g005410.2.1 Solyc03g005410.2.1 LOC543838 LOC543838
"Solyc01g100020.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g100020.2.1Uncharacterized protein (1052 aa)    
Predicted Functional Partners:
Solyc09g083330.2.1
Phosphatidate cytidylyltransferase (424 aa)
   
 
  0.945
Solyc03g005410.2.1
Phosphatidate cytidylyltransferase (426 aa)
   
 
  0.945
Solyc01g090940.2.1
Phosphatidate cytidylyltransferase (416 aa)
   
 
  0.945
Solyc05g010440.1.1
Uncharacterized protein (96 aa)
         
  0.935
LOC543838
Phosphatidylserine decarboxylase (445 aa)
       
  0.935
PSD2
Phosphatidylserine decarboxylase proenzyme 2 ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine (648 aa)
         
  0.935
Solyc12g056420.1.1
Uncharacterized protein (459 aa)
         
  0.929
Solyc08g080340.2.1
Uncharacterized protein (463 aa)
         
  0.929
Solyc08g007860.2.1
Uncharacterized protein (463 aa)
         
  0.929
Solyc11g065890.1.1
Uncharacterized protein (377 aa)
     
  0.913
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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