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Solyc11g064790.1.1 Solyc11g064790.1.1 Solyc01g008820.2.1 Solyc01g008820.2.1 Solyc12g038600.1.1 Solyc12g038600.1.1 Solyc00g030210.1.1 Solyc00g030210.1.1 Solyc08g068270.2.1 Solyc08g068270.2.1 Solyc01g104250.2.1 Solyc01g104250.2.1 Solyc05g056260.2.1 Solyc05g056260.2.1 Solyc03g083440.2.1 Solyc03g083440.2.1 Solyc03g063560.2.1 Solyc03g063560.2.1 Solyc03g026210.2.1 Solyc03g026210.2.1 CNX5 CNX5
"Solyc01g104250.2.1" - Rhomboid-like protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Solyc01g104250.2.1Rhomboid-like protein (329 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.633
Solyc08g068270.2.1
Rhomboid-like protein (276 aa)
   
     
  0.624
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.570
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
   
   
  0.480
Solyc03g026210.2.1
Uncharacterized protein (297 aa)
         
  0.478
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
              0.461
Solyc11g064790.1.1
Uncharacterized protein (339 aa)
           
  0.459
Solyc01g008820.2.1
Uncharacterized protein (338 aa)
           
  0.459
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.453
Solyc12g038600.1.1
Rhomboid-like protein (190 aa)
           
  0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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