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Solyc10g038080.1.1 Solyc10g038080.1.1 LOC543548 LOC543548 Solyc02g081000.1.1 Solyc02g081000.1.1 Solyc05g056260.2.1 Solyc05g056260.2.1 Solyc01g111990.2.1 Solyc01g111990.2.1 Solyc07g008950.2.1 Solyc07g008950.2.1 Solyc11g012140.1.1 Solyc11g012140.1.1 Solyc01g008310.2.1 Solyc01g008310.2.1 Solyc02g080980.2.1 Solyc02g080980.2.1 Solyc02g069140.1.1 Solyc02g069140.1.1 LARS LARS
"Solyc01g111990.2.1" - Alanyl-tRNA synthetase in Solanum lycopersicum
Nodes:
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Solyc01g111990.2.1Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain (987 aa)    
Predicted Functional Partners:
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.953
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
 
  0.938
Solyc10g038080.1.1
Uncharacterized protein (514 aa)
   
 
  0.935
LOC543548
Dehydroquinate dehydratase/shikimate-NADP oxidoreductase (545 aa)
   
 
  0.935
Solyc02g069140.1.1
Uncharacterized protein (1041 aa)
   
 
  0.935
LARS
leucine--tRNA ligase, cytoplasmic (1079 aa)
   
 
  0.935
Solyc01g008310.2.1
Uncharacterized protein (576 aa)
   
 
  0.876
Solyc02g080980.2.1
Uncharacterized protein (425 aa)
   
 
  0.864
Solyc11g012140.1.1
Uncharacterized protein (1182 aa)
   
 
  0.859
Solyc02g081000.1.1
Uncharacterized protein (205 aa)
   
 
  0.842
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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