Full Link:
STRINGSTRING
Solyc02g010610.1.1 Solyc02g010610.1.1 Solyc11g030830.1.1 Solyc11g030830.1.1 Solyc11g056340.1.1 Solyc11g056340.1.1 psbA psbA Solyc10g045230.1.1 Solyc10g045230.1.1 Solyc10g061830.1.1 Solyc10g061830.1.1 Solyc11g013780.1.1 Solyc11g013780.1.1 Solyc01g048590.1.1 Solyc01g048590.1.1 Solyc01g011480.1.1 Solyc01g011480.1.1 Solyc02g021290.1.1 Solyc02g021290.1.1 Solyc03g013500.1.1 Solyc03g013500.1.1
"Solyc02g021290.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g021290.1.1Uncharacterized protein (51 aa)    
Predicted Functional Partners:
Solyc11g056340.1.1
Uncharacterized protein (63 aa)
   
          0.526
Solyc11g030830.1.1
Uncharacterized protein (92 aa)
   
          0.526
Solyc10g061830.1.1
Uncharacterized protein (63 aa)
   
          0.526
Solyc03g013500.1.1
Uncharacterized protein (84 aa)
   
          0.526
Solyc02g010610.1.1
Uncharacterized protein (63 aa)
   
          0.526
Solyc11g013780.1.1
Uncharacterized protein (71 aa)
   
          0.525
Solyc01g048590.1.1
Uncharacterized protein (83 aa)
   
          0.525
Solyc01g011480.1.1
Uncharacterized protein (85 aa)
   
          0.524
Solyc10g045230.1.1
Uncharacterized protein (99 aa)
   
          0.520
psbA
Photosystem II protein D1; Photosystem II (PSII) is a light-driven water- plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors (53 aa)
   
          0.519
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (1%)