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Solyc00g017550.1.1 Solyc00g017550.1.1 Solyc01g047590.1.1 Solyc01g047590.1.1 Solyc11g062270.1.1 Solyc11g062270.1.1 LOC544156 LOC544156 Solyc10g033560.1.1 Solyc10g033560.1.1 Solyc08g082740.2.1 Solyc08g082740.2.1 Solyc02g062840.1.1 Solyc02g062840.1.1 Solyc00g017540.1.1 Solyc00g017540.1.1 Solyc01g047580.1.1 Solyc01g047580.1.1 Solyc00g287330.1.1 Solyc00g287330.1.1 Solyc00g111170.1.1 Solyc00g111170.1.1
"Solyc02g062840.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g062840.1.1Uncharacterized protein (97 aa)    
Predicted Functional Partners:
Solyc11g062270.1.1
Signal recognition particle subunit SRP72 ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (664 aa)
     
  0.984
Solyc10g033560.1.1
Uncharacterized protein (255 aa)
     
  0.984
Solyc01g047590.1.1
Uncharacterized protein (404 aa)
     
  0.984
Solyc01g047580.1.1
Uncharacterized protein (186 aa)
     
  0.984
Solyc00g287330.1.1
Annotation not available (186 aa)
     
  0.984
Solyc00g111170.1.1
Annotation not available (163 aa)
     
  0.984
Solyc00g017550.1.1
Annotation not available (100 aa)
     
  0.984
Solyc00g017540.1.1
Annotation not available (100 aa)
     
  0.984
Solyc08g082740.2.1
Uncharacterized protein (213 aa)
     
  0.976
LOC544156
Signal recognition particle 54 kDa protein 2 ; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (499 aa)
     
  0.974
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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