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Solyc09g082890.1.1 Solyc09g082890.1.1 Solyc01g106440.2.1 Solyc01g106440.2.1 Solyc08g023460.2.1 Solyc08g023460.2.1 Solyc08g082480.2.1 Solyc08g082480.2.1 Solyc07g007430.2.1 Solyc07g007430.2.1 Solyc05g054800.1.1 Solyc05g054800.1.1 Solyc02g086800.2.1 Solyc02g086800.2.1 Solyc01g095990.2.1 Solyc01g095990.2.1 Solyc05g050590.2.1 Solyc05g050590.2.1 Solyc03g083350.2.1 Solyc03g083350.2.1 Solyc02g036440.2.1 Solyc02g036440.2.1
"Solyc02g086800.2.1" - Phospholipid-transporting ATPase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g086800.2.1Phospholipid-transporting ATPase (1175 aa)    
Predicted Functional Partners:
Solyc08g023460.2.1
Uncharacterized protein (342 aa)
     
 
  0.608
Solyc05g054800.1.1
Uncharacterized protein (350 aa)
     
 
  0.608
Solyc02g036440.2.1
Uncharacterized protein (344 aa)
     
 
  0.608
Solyc07g007430.2.1
Palmitoyltransferase (631 aa)
       
      0.554
Solyc01g106440.2.1
Palmitoyltransferase (542 aa)
       
      0.554
Solyc08g082480.2.1
Uncharacterized protein (583 aa)
     
 
  0.523
Solyc05g050590.2.1
Uncharacterized protein (568 aa)
     
 
  0.523
Solyc03g083350.2.1
Uncharacterized protein (580 aa)
     
 
  0.523
Solyc01g095990.2.1
Uncharacterized protein (571 aa)
     
 
  0.523
Solyc09g082890.1.1
Uncharacterized protein (384 aa)
       
 
  0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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