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STRINGSTRING
Solyc05g052980.2.1 Solyc05g052980.2.1 Solyc03g006960.2.1 Solyc03g006960.2.1 Solyc03g007310.2.1 Solyc03g007310.2.1 Solyc06g076400.2.1 Solyc06g076400.2.1 Solyc08g008120.2.1 Solyc08g008120.2.1 Solyc12g096020.1.1 Solyc12g096020.1.1
"Solyc03g007310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g007310.2.1Uncharacterized protein (185 aa)    
Predicted Functional Partners:
Solyc05g052980.2.1
Uncharacterized protein (409 aa)
       
  0.941
Solyc12g096020.1.1
Uncharacterized protein (508 aa)
       
 
  0.926
Solyc03g006960.2.1
Uncharacterized protein (376 aa)
       
  0.845
Solyc06g076400.2.1
Uncharacterized protein (410 aa)
       
 
  0.720
Solyc08g008120.2.1
Uncharacterized protein (93 aa)
       
      0.546
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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