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Solyc12g021130.1.1 Solyc12g021130.1.1 pds pds Psy1 Psy1 GGPS1 GGPS1 zds zds Solyc10g005840.2.1 Solyc10g005840.2.1 GGPS2 GGPS2 Solyc10g005820.1.1 Solyc10g005820.1.1 CRTISO CRTISO Solyc04g082750.2.1 Solyc04g082750.2.1 FPS1 FPS1
"Psy1" - Phytoene synthase 1, chloroplastic in Solanum lycopersicum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Psy1Phytoene synthase 1, chloroplastic ; Catalyzes the reaction from prephytoene diphosphate to phytoene (412 aa)    
Predicted Functional Partners:
pds
Phytoene dehydrogenase, chloroplastic/chromoplastic ; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene (583 aa)
 
 
  0.994
zds
Zeta-carotene desaturase, chloroplastic/chromoplastic ; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (588 aa)
 
 
  0.970
CRTISO
Prolycopene isomerase, chloroplastic ; Carotene cis-trans-isomerase that converts 7,9,9’-tri- cis-neurosporene to 9’-cis-neurosporene and 7,9,9’,7’-tetra-cis- lycopene (also known as prolycopene) into all-trans-lycopene. Isomerization requires redox-active components, suggesting that isomerization is achieved by a reversible redox reaction acting at specific double bonds. Isomerizes adjacent cis-double bonds at C7 and C9 pairwise into the trans-configuration, but is incapable of isomerizing single cis-double bonds at C9 and C9’ (615 aa)
 
 
  0.952
FPS1
Farnesyl pyrophosphate synthase (342 aa)
   
  0.941
Solyc10g005840.2.1
Uncharacterized protein (248 aa)
   
  0.941
Solyc10g005820.1.1
Uncharacterized protein (119 aa)
   
  0.941
GGPS2
Geranylgeranyl pyrophosphate synthase 2 (363 aa)
   
  0.921
GGPS1
Geranylgeranyl pyrophosphate synthase 1 (365 aa)
   
  0.917
Solyc12g021130.1.1
Reticulon-like protein (577 aa)
     
 
  0.917
Solyc04g082750.2.1
Uncharacterized protein (478 aa)
     
 
  0.917
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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