Full Link:
STRINGSTRING
Solyc12g011120.1.1 Solyc12g011120.1.1 LOC543968 LOC543968 Solyc09g009190.2.1 Solyc09g009190.2.1 AGP-S1 AGP-S1 Solyc07g064830.2.1 Solyc07g064830.2.1 Solyc04g082400.2.1 Solyc04g082400.2.1 Solyc05g012510.2.1 Solyc05g012510.2.1 Solyc08g015670.2.1 Solyc08g015670.2.1 Solyc03g083090.2.1 Solyc03g083090.2.1 agpL3 agpL3 AGP-S2 AGP-S2
"Solyc03g083090.2.1" - Starch synthase, chloroplastic/amyloplastic in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g083090.2.1Starch synthase, chloroplastic/amyloplastic (641 aa)    
Predicted Functional Partners:
LOC543968
Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic ; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (521 aa)
 
 
  0.986
Solyc08g015670.2.1
Uncharacterized protein (464 aa)
 
 
  0.985
Solyc12g011120.1.1
ADP-glucose pyrophosphorylase ; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (442 aa)
 
 
  0.985
AGP-S1
Glucose-1-phosphate adenylyltransferase ; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (524 aa)
 
 
  0.985
AGP-S2
Glucose-1-phosphate adenylyltransferase ; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (518 aa)
 
 
  0.985
agpL3
Glucose-1-phosphate adenylyltransferase ; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (515 aa)
 
 
  0.985
Solyc04g082400.2.1
Uncharacterized protein (844 aa)
 
 
  0.981
Solyc07g064830.2.1
Uncharacterized protein (903 aa)
 
 
  0.978
Solyc09g009190.2.1
Uncharacterized protein (876 aa)
 
 
  0.976
Solyc05g012510.2.1
Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (967 aa)
 
 
  0.971
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (2%)