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Solyc12g056520.1.1 Solyc12g056520.1.1 Solyc12g088990.1.1 Solyc12g088990.1.1 Solyc04g005850.1.1 Solyc04g005850.1.1 Solyc09g072720.1.1 Solyc09g072720.1.1 Solyc07g025170.2.1 Solyc07g025170.2.1 Solyc07g025160.2.1 Solyc07g025160.2.1 Solyc04g071350.2.1 Solyc04g071350.2.1 Solyc09g007860.2.1 Solyc09g007860.2.1 Solyc03g119440.2.1 Solyc03g119440.2.1 LOC543501 LOC543501 Solyc05g047710.2.1 Solyc05g047710.2.1
"Solyc03g119440.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g119440.2.1Uncharacterized protein (837 aa)    
Predicted Functional Partners:
Solyc09g007860.2.1
Uncharacterized protein (545 aa)
           
  0.510
Solyc05g047710.2.1
Uncharacterized protein (495 aa)
           
  0.489
LOC543501
CLB1 (505 aa)
           
  0.489
Solyc12g056520.1.1
Uncharacterized protein (977 aa)
       
      0.468
Solyc04g071350.2.1
Uncharacterized protein (1106 aa)
       
      0.468
Solyc12g088990.1.1
Uncharacterized protein (888 aa)
       
      0.422
Solyc09g072720.1.1
Uncharacterized protein (756 aa)
       
      0.422
Solyc07g025170.2.1
Uncharacterized protein (262 aa)
       
      0.422
Solyc07g025160.2.1
Uncharacterized protein (584 aa)
       
      0.422
Solyc04g005850.1.1
Uncharacterized protein (756 aa)
       
      0.422
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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