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PAL6 PAL6 PAL2 PAL2 PAL PAL PAL5 PAL5 Solyc03g120320.1.1 Solyc03g120320.1.1 Solyc09g007890.1.1 Solyc09g007890.1.1 PAL4 PAL4 Solyc11g042930.1.1 Solyc11g042930.1.1 Solyc10g055450.1.1 Solyc10g055450.1.1 Solyc01g111530.2.1 Solyc01g111530.2.1 Solyc09g007310.2.1 Solyc09g007310.2.1
"Solyc03g120320.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g120320.1.1Uncharacterized protein (355 aa)    
Predicted Functional Partners:
PAL6
Phenylalanine ammonia-lyase 6 (711 aa)
       
      0.588
PAL
Phenylalanine ammonia-lyase ; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton (721 aa)
       
      0.588
PAL5
Phenylalanine ammonia-lyase ; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton (721 aa)
       
      0.588
PAL4
Phenylalanine ammonia-lyase-like (721 aa)
       
      0.588
Solyc09g007890.1.1
Phenylalanine ammonia-lyase (719 aa)
       
      0.588
PAL2
Phenylalanine ammonia-lyase 2 (EC-4.3.1.24) (709 aa)
       
      0.588
Solyc10g055450.1.1
Uncharacterized protein (1846 aa)
         
  0.483
Solyc09g007310.2.1
Uncharacterized protein (1553 aa)
         
  0.483
Solyc01g111530.2.1
Uncharacterized protein (1860 aa)
         
  0.483
Solyc11g042930.1.1
Uncharacterized protein (155 aa)
       
    0.482
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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