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Solyc04g016330.2.1 Solyc04g016330.2.1 Solyc01g088150.2.1 Solyc01g088150.2.1 Solyc03g120540.2.1 Solyc03g120540.2.1 Solyc09g010560.1.1 Solyc09g010560.1.1 Solyc03g044430.2.1 Solyc03g044430.2.1 Solyc01g087500.2.1 Solyc01g087500.2.1 Solyc06g048920.2.1 Solyc06g048920.2.1 Solyc02g093290.2.1 Solyc02g093290.2.1 Solyc08g082830.2.1 Solyc08g082830.2.1 Solyc02g067930.2.1 Solyc02g067930.2.1 Solyc00g130190.1.1 Solyc00g130190.1.1
"Solyc03g120540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g120540.2.1Uncharacterized protein (197 aa)    
Predicted Functional Partners:
Solyc09g010560.1.1
Uncharacterized protein (1268 aa)
   
 
    0.788
Solyc08g082830.2.1
Uncharacterized protein (731 aa)
   
   
  0.720
Solyc03g044430.2.1
Uncharacterized protein (566 aa)
   
 
  0.645
Solyc02g093290.2.1
Uncharacterized protein (558 aa)
   
 
  0.645
Solyc00g130190.1.1
Annotation not available (730 aa)
   
 
  0.645
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.492
Solyc06g048920.2.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (413 aa)
   
      0.486
Solyc04g016330.2.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (464 aa)
   
      0.486
Solyc02g067930.2.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (369 aa)
   
      0.486
Solyc01g088150.2.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (464 aa)
   
      0.486
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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