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Solyc12g010180.1.1 Solyc12g010180.1.1 Solyc12g088000.1.1 Solyc12g088000.1.1 Solyc12g096240.1.1 Solyc12g096240.1.1 LOC543970 LOC543970 Solyc10g008200.2.1 Solyc10g008200.2.1 LOC778225 LOC778225 Solyc10g075170.1.1 Solyc10g075170.1.1 Solyc10g007110.2.1 Solyc10g007110.2.1 Solyc04g005200.2.1 Solyc04g005200.2.1 Solyc09g011870.1.1 Solyc09g011870.1.1 Solyc02g069920.2.1 Solyc02g069920.2.1
"Solyc04g005200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g005200.2.1Uncharacterized protein (247 aa)    
Predicted Functional Partners:
LOC778225
Isochorismate synthase (580 aa)
   
   
    0.942
Solyc02g069920.2.1
Uncharacterized protein (560 aa)
         
    0.900
Solyc12g096240.1.1
Uncharacterized protein (424 aa)
         
    0.800
Solyc12g088000.1.1
Uncharacterized protein (423 aa)
         
    0.800
Solyc12g010180.1.1
Uncharacterized protein (283 aa)
         
    0.800
LOC543970
Chorimate mutase (255 aa)
         
    0.800
Solyc10g075170.1.1
Uncharacterized protein (368 aa)
         
    0.800
Solyc10g008200.2.1
Uncharacterized protein (419 aa)
         
    0.800
Solyc10g007110.2.1
Uncharacterized protein (407 aa)
         
    0.800
Solyc09g011870.1.1
Uncharacterized protein (390 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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