Full Link:
STRINGSTRING
Solyc10g006300.2.1 Solyc10g006300.2.1 Solyc09g009600.1.1 Solyc09g009600.1.1 Solyc12g009800.1.1 Solyc12g009800.1.1 Solyc04g008250.1.1 Solyc04g008250.1.1 Solyc09g091910.1.1 Solyc09g091910.1.1 Solyc01g087500.2.1 Solyc01g087500.2.1 Solyc01g103950.2.1 Solyc01g103950.2.1 Solyc09g009610.1.1 Solyc09g009610.1.1 Solyc08g083250.2.1 Solyc08g083250.2.1 Solyc07g064500.2.1 Solyc07g064500.2.1 Solyc07g053070.1.1 Solyc07g053070.1.1
"Solyc04g008250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g008250.1.1Uncharacterized protein (264 aa)    
Predicted Functional Partners:
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.607
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
       
    0.540
Solyc12g009800.1.1
Purple acid phosphatase (477 aa)
           
  0.426
Solyc10g006300.2.1
Uncharacterized protein (438 aa)
           
  0.426
Solyc09g091910.1.1
Purple acid phosphatase (555 aa)
           
  0.426
Solyc09g009610.1.1
Purple acid phosphatase (425 aa)
           
  0.426
Solyc09g009600.1.1
Purple acid phosphatase (441 aa)
           
  0.426
Solyc08g083250.2.1
Uncharacterized protein (608 aa)
           
  0.426
Solyc07g064500.2.1
Purple acid phosphatase (436 aa)
           
  0.426
Solyc07g053070.1.1
Purple acid phosphatase (456 aa)
           
  0.426
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (2%)