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STRINGSTRING
Solyc11g042930.1.1 Solyc11g042930.1.1 SSK3 SSK3 Solyc06g062940.2.1 Solyc06g062940.2.1 Solyc12g009120.1.1 Solyc12g009120.1.1 Solyc11g008420.1.1 Solyc11g008420.1.1 Solyc11g008400.1.1 Solyc11g008400.1.1 Solyc04g082410.2.1 Solyc04g082410.2.1 Solyc04g011430.2.1 Solyc04g011430.2.1 CNX5 CNX5 SSK2 SSK2 Solyc10g055610.1.1 Solyc10g055610.1.1
"Solyc04g011430.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g011430.2.1Uncharacterized protein (165 aa)    
Predicted Functional Partners:
Solyc12g009120.1.1
Uncharacterized protein (116 aa)
     
  0.962
Solyc06g062940.2.1
Uncharacterized protein (118 aa)
     
  0.962
Solyc04g082410.2.1
Uncharacterized protein (322 aa)
     
  0.950
CNX5
Molybdenum cofactor synthesis protein 3 ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is [...] (460 aa)
     
  0.930
Solyc11g042930.1.1
Uncharacterized protein (155 aa)
     
  0.849
Solyc11g008420.1.1
Uncharacterized protein (189 aa)
     
  0.849
Solyc11g008400.1.1
Uncharacterized protein (180 aa)
     
  0.849
SSK3
SKP1-like protein 11-like (158 aa)
     
  0.849
SSK2
SKP1-like protein 11-like (158 aa)
     
  0.849
Solyc10g055610.1.1
Uncharacterized protein (150 aa)
     
  0.849
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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