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Solyc07g024070.1.1 Solyc07g024070.1.1 UBC UBC Solyc10g011740.2.1 Solyc10g011740.2.1 Solyc11g071260.1.1 Solyc11g071260.1.1 Solyc08g081950.2.1 Solyc08g081950.2.1 Solyc04g045480.2.1 Solyc04g045480.2.1 UBC3 UBC3 Ubc13-2 Ubc13-2 Solyc08g008220.2.1 Solyc08g008220.2.1 Solyc07g066080.2.1 Solyc07g066080.2.1 Fni3 Fni3
"Solyc04g045480.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g045480.2.1Uncharacterized protein (301 aa)    
Predicted Functional Partners:
UBC
Ubiquitin conjugating enzyme E2 (148 aa)
       
  0.739
Solyc11g071260.1.1
Uncharacterized protein (157 aa)
       
  0.739
Solyc10g011740.2.1
Uncharacterized protein (148 aa)
       
  0.739
Ubc13-2
Ubiquitin-conjugating enzyme E2 36-like (153 aa)
       
  0.739
Solyc08g081950.2.1
Uncharacterized protein (119 aa)
       
  0.739
Solyc08g008220.2.1
Uncharacterized protein (148 aa)
       
  0.739
Solyc07g066080.2.1
Uncharacterized protein (148 aa)
       
  0.739
Fni3
Ubiquitin-conjugating enzyme E2 35-like (153 aa)
       
  0.739
Solyc07g024070.1.1
Uncharacterized protein (648 aa)
       
  0.739
UBC3
Ubiquitin-conjugating enzyme E2-17 kDa ; Catalyzes the covalent attachment of ubiquitin to other proteins. Mediates the selective degradation of short-lived and abnormal proteins (148 aa)
       
  0.739
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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