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Solyc11g019950.1.1 Solyc11g019950.1.1 asc-1 asc-1 Solyc02g022910.2.1 Solyc02g022910.2.1 NIA NIA Solyc08g066020.1.1 Solyc08g066020.1.1 Solyc02g022890.1.1 Solyc02g022890.1.1 Solyc04g072180.1.1 Solyc04g072180.1.1 Solyc03g051970.2.1 Solyc03g051970.2.1 pcna pcna Solyc02g070050.2.1 Solyc02g070050.2.1 Solyc04g077150.2.1 Solyc04g077150.2.1
"Solyc04g072180.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g072180.1.1Uncharacterized protein (154 aa)    
Predicted Functional Partners:
Solyc03g051970.2.1
Uncharacterized protein (404 aa)
       
 
  0.713
Solyc02g070050.2.1
Uncharacterized protein (161 aa)
     
 
  0.596
Solyc02g022910.2.1
Uncharacterized protein (290 aa)
     
 
  0.596
Solyc02g022890.1.1
Uncharacterized protein (69 aa)
     
 
  0.596
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
       
      0.578
Solyc11g019950.1.1
Uncharacterized protein (486 aa)
       
 
  0.487
Solyc08g066020.1.1
Uncharacterized protein (511 aa)
       
 
  0.487
Solyc04g077150.2.1
Uncharacterized protein (129 aa)
     
 
  0.457
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
   
 
  0.447
asc-1
ASC1-like protein ; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (By similarity) (305 aa)
       
 
  0.427
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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