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STRINGSTRING
Solyc12g021280.1.1 Solyc12g021280.1.1 cdc2A-1 cdc2A-1 Solyc12g007200.1.1 Solyc12g007200.1.1 cdkB2 cdkB2 CycD3;3 CycD3;3 RBR1 RBR1 Solyc10g085680.1.1 Solyc10g085680.1.1 Solyc11g070140.1.1 Solyc11g070140.1.1 cdkB1 cdkB1 SICDKA1 SICDKA1 Solyc03g083420.2.1 Solyc03g083420.2.1
CycD3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CycD3;3CycD3;3 protein (336 aa)    
Predicted Functional Partners:
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.940
cdkB2
B2-type cyclin dependent kinase (315 aa)
       
  0.923
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
       
  0.879
Solyc12g021280.1.1
Uncharacterized protein (555 aa)
       
  0.879
Solyc12g007200.1.1
Uncharacterized protein (470 aa)
       
  0.879
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
       
  0.879
Solyc10g085680.1.1
Uncharacterized protein (497 aa)
       
  0.879
cdkB1
B1-type cyclin dependent kinase (303 aa)
       
  0.879
SICDKA1
Cyclin-dependent protein kinase cdc2A-1 (307 aa)
       
  0.879
Solyc03g083420.2.1
Uncharacterized protein (670 aa)
       
  0.879
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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