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HY5 HY5 SERK3A SERK3A CYP90B3 CYP90B3 CURL3 CURL3 Solyc01g009990.2.1 Solyc01g009990.2.1 LOC544232 LOC544232 Solyc04g079980.2.1 Solyc04g079980.2.1 Solyc02g063010.2.1 Solyc02g063010.2.1 Solyc02g072300.2.1 Solyc02g072300.2.1 Solyc07g055200.2.1 Solyc07g055200.2.1 Solyc03g006070.2.1 Solyc03g006070.2.1
"Solyc04g079980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g079980.2.1Uncharacterized protein (327 aa)    
Predicted Functional Partners:
Solyc03g006070.2.1
Uncharacterized protein (382 aa)
       
  0.915
Solyc02g072300.2.1
Uncharacterized protein (382 aa)
       
  0.915
Solyc02g063010.2.1
Uncharacterized protein (319 aa)
       
0.839
LOC544232
Mature anther-specific protein LAT61 (333 aa)
         
 
0.800
HY5
Transcription factor HY5 ; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
       
 
  0.723
Solyc01g009990.2.1
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (248 aa)
       
 
  0.622
Solyc07g055200.2.1
Uncharacterized protein (437 aa)
       
 
  0.592
CURL3
Brassinosteroid LRR receptor kinase ; Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants (By similarity) (1207 aa)
       
 
  0.561
CYP90B3
Cytochrome P450 (491 aa)
           
  0.512
SERK3A
Somatic embryogenesis receptor kinase 3A (615 aa)
           
  0.493
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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