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Solyc10g085580.1.1 Solyc10g085580.1.1 Solyc12g088290.1.1 Solyc12g088290.1.1 Solyc10g039190.1.1 Solyc10g039190.1.1 Solyc03g112820.2.1 Solyc03g112820.2.1 Solyc09g018520.1.1 Solyc09g018520.1.1 Solyc02g032920.2.1 Solyc02g032920.2.1 Solyc02g089280.2.1 Solyc02g089280.2.1 Solyc09g018530.1.1 Solyc09g018530.1.1 Solyc05g008030.1.1 Solyc05g008030.1.1 Solyc04g077680.2.1 Solyc04g077680.2.1 Solyc04g077740.1.1 Solyc04g077740.1.1
"Solyc05g008030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g008030.1.1Uncharacterized protein (269 aa)    
Predicted Functional Partners:
Solyc10g085580.1.1
Uncharacterized protein (701 aa)
     
      0.994
Solyc03g112820.2.1
U3 small nucleolar ribonucleoprotein protein MPP10 ; Involved in nucleolar processing of pre-18S ribosomal RNA (552 aa)
     
  0.994
Solyc02g032920.2.1
Uncharacterized protein (652 aa)
     
  0.994
Solyc12g088290.1.1
Uncharacterized protein (820 aa)
     
  0.991
Solyc04g077740.1.1
Uncharacterized protein (360 aa)
     
  0.991
Solyc04g077680.2.1
Uncharacterized protein (809 aa)
     
  0.991
Solyc02g089280.2.1
Uncharacterized protein (182 aa)
     
  0.988
Solyc10g039190.1.1
Uncharacterized protein (950 aa)
     
    0.986
Solyc09g018530.1.1
Uncharacterized protein (159 aa)
     
    0.986
Solyc09g018520.1.1
Uncharacterized protein (131 aa)
     
    0.986
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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