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Solyc05g007260.2.1 Solyc05g007260.2.1 Solyc03g115820.2.1 Solyc03g115820.2.1 Solyc12g040580.1.1 Solyc12g040580.1.1 Solyc12g056120.1.1 Solyc12g056120.1.1 Solyc10g018300.1.1 Solyc10g018300.1.1 Solyc08g076220.2.1 Solyc08g076220.2.1 Solyc05g050970.2.1 Solyc05g050970.2.1 Solyc05g010260.2.1 Solyc05g010260.2.1 Solyc01g018020.1.1 Solyc01g018020.1.1 Solyc05g008370.1.1 Solyc05g008370.1.1 Solyc07g062070.2.1 Solyc07g062070.2.1
"Solyc05g008370.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g008370.1.1Uncharacterized protein (268 aa)    
Predicted Functional Partners:
Solyc10g018300.1.1
Uncharacterized protein (741 aa)
   
  0.969
Solyc05g050970.2.1
Uncharacterized protein (774 aa)
   
  0.969
Solyc01g018020.1.1
Uncharacterized protein (787 aa)
   
  0.969
Solyc05g007260.2.1
Ribulose-phosphate 3-epimerase (216 aa)
   
  0.968
Solyc03g115820.2.1
Uncharacterized protein (282 aa)
   
  0.968
Solyc12g056120.1.1
6-phosphogluconate dehydrogenase, decarboxylating ; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (496 aa)
   
 
  0.938
Solyc12g040580.1.1
Uncharacterized protein (138 aa)
   
 
  0.938
Solyc05g010260.2.1
Uncharacterized protein (271 aa)
   
 
  0.938
Solyc07g062070.2.1
Uncharacterized protein (376 aa)
       
  0.936
Solyc08g076220.2.1
Phosphoribulokinase (400 aa)
     
 
  0.931
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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