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Solyc05g051540.1.1 Solyc05g051540.1.1 Solyc03g113070.2.1 Solyc03g113070.2.1 Solyc10g049480.1.1 Solyc10g049480.1.1 Solyc03g113080.2.1 Solyc03g113080.2.1 Solyc04g025180.2.1 Solyc04g025180.2.1 Solyc06g070930.2.1 Solyc06g070930.2.1 Solyc05g053600.2.1 Solyc05g053600.2.1 Solyc03g113040.2.1 Solyc03g113040.2.1 Solyc04g015970.2.1 Solyc04g015970.2.1 Solyc01g006720.2.1 Solyc01g006720.2.1 Solyc00g233480.1.1 Solyc00g233480.1.1
"Solyc05g053600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g053600.2.1Uncharacterized protein (1412 aa)    
Predicted Functional Partners:
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
   
  0.667
Solyc06g070930.2.1
Uncharacterized protein (274 aa)
   
  0.613
Solyc05g051540.1.1
Uncharacterized protein (130 aa)
   
  0.613
Solyc04g025180.2.1
Uncharacterized protein (115 aa)
   
  0.613
Solyc03g113080.2.1
Uncharacterized protein (358 aa)
   
  0.613
Solyc03g113070.2.1
Uncharacterized protein (576 aa)
   
  0.613
Solyc00g233480.1.1
Annotation not available (183 aa)
   
  0.613
Solyc01g006720.2.1
Uncharacterized protein (724 aa)
   
0.610
Solyc04g015970.2.1
Uncharacterized protein (1909 aa)
   
0.585
Solyc03g113040.2.1
Uncharacterized protein (945 aa)
   
0.584
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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