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Solyc01g011100.2.1 Solyc01g011100.2.1 Solyc12g062510.1.1 Solyc12g062510.1.1 Solyc11g017190.1.1 Solyc11g017190.1.1 Solyc11g017170.1.1 Solyc11g017170.1.1 Solyc10g074940.1.1 Solyc10g074940.1.1 Solyc05g054800.1.1 Solyc05g054800.1.1 Solyc05g006640.2.1 Solyc05g006640.2.1 Solyc01g011090.2.1 Solyc01g011090.2.1 Solyc03g121810.2.1 Solyc03g121810.2.1 Solyc02g069430.2.1 Solyc02g069430.2.1 Solyc02g069420.2.1 Solyc02g069420.2.1
"Solyc05g054800.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g054800.1.1Uncharacterized protein (350 aa)    
Predicted Functional Partners:
Solyc12g062510.1.1
Uncharacterized protein (143 aa)
     
 
  0.631
Solyc11g017190.1.1
Uncharacterized protein (347 aa)
     
 
  0.631
Solyc11g017170.1.1
Uncharacterized protein (813 aa)
     
 
  0.631
Solyc10g074940.1.1
Phospholipid-transporting ATPase (1324 aa)
     
 
  0.631
Solyc05g006640.2.1
Phospholipid-transporting ATPase (1221 aa)
     
 
  0.631
Solyc03g121810.2.1
Phospholipid-transporting ATPase (1210 aa)
     
 
  0.631
Solyc02g069430.2.1
Phospholipid-transporting ATPase (492 aa)
     
 
  0.631
Solyc02g069420.2.1
Phospholipid-transporting ATPase (803 aa)
     
 
  0.631
Solyc01g011100.2.1
Phospholipid-transporting ATPase (1005 aa)
     
 
  0.631
Solyc01g011090.2.1
Uncharacterized protein (249 aa)
     
 
  0.631
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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