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Solyc08g081080.2.1 Solyc08g081080.2.1 Solyc05g009570.2.1 Solyc05g009570.2.1 Solyc10g045310.1.1 Solyc10g045310.1.1 Solyc05g055430.2.1 Solyc05g055430.2.1 Solyc03g114930.2.1 Solyc03g114930.2.1 Solyc03g013240.2.1 Solyc03g013240.2.1 Solyc10g054420.1.1 Solyc10g054420.1.1 Solyc07g005120.2.1 Solyc07g005120.2.1 Solyc04g011900.2.1 Solyc04g011900.2.1 Solyc01g098640.2.1 Solyc01g098640.2.1 Solyc05g012700.2.1 Solyc05g012700.2.1
"Solyc05g055430.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc05g055430.2.1Uncharacterized protein (238 aa)    
Predicted Functional Partners:
Solyc03g114930.2.1
Uncharacterized protein (246 aa)
   
        0.516
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
          0.503
Solyc10g054420.1.1
Uncharacterized protein (227 aa)
   
        0.497
Solyc05g012700.2.1
Uncharacterized protein (291 aa)
   
        0.482
Solyc03g013240.2.1
Uncharacterized protein (446 aa)
   
        0.472
Solyc04g011900.2.1
Uncharacterized protein (330 aa)
   
        0.446
Solyc10g045310.1.1
Uncharacterized protein (229 aa)
   
          0.444
Solyc08g081080.2.1
Uncharacterized protein (277 aa)
   
          0.439
Solyc05g009570.2.1
Uncharacterized protein (167 aa)
   
          0.433
Solyc07g005120.2.1
Uncharacterized protein (343 aa)
   
          0.432
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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