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Solyc12g017470.1.1 Solyc12g017470.1.1 Solyc07g017290.2.1 Solyc07g017290.2.1 Solyc04g057960.2.1 Solyc04g057960.2.1 Solyc06g008730.2.1 Solyc06g008730.2.1 Solyc10g005650.2.1 Solyc10g005650.2.1 Solyc12g040480.1.1 Solyc12g040480.1.1 Solyc12g040500.1.1 Solyc12g040500.1.1 Solyc03g119030.2.1 Solyc03g119030.2.1 Solyc05g054950.2.1 Solyc05g054950.2.1 Solyc04g055120.2.1 Solyc04g055120.2.1 Solyc06g060720.2.1 Solyc06g060720.2.1
"Solyc06g008730.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g008730.2.1Uncharacterized protein (929 aa)    
Predicted Functional Partners:
Solyc04g057960.2.1
Uncharacterized protein (1128 aa)
   
0.995
Solyc06g060720.2.1
Uncharacterized protein (248 aa)
     
 
  0.903
Solyc12g017470.1.1
Uncharacterized protein (358 aa)
       
 
  0.782
Solyc07g017290.2.1
Uncharacterized protein (351 aa)
       
 
  0.782
Solyc10g005650.2.1
Uncharacterized protein (744 aa)
     
 
  0.661
Solyc04g055120.2.1
Uncharacterized protein (1344 aa)
     
   
  0.566
Solyc05g054950.2.1
Peroxin-12 ; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
 
  0.547
Solyc12g040500.1.1
Uncharacterized protein (233 aa)
     
   
  0.533
Solyc12g040480.1.1
Uncharacterized protein (173 aa)
     
   
  0.533
Solyc03g119030.2.1
Uncharacterized protein (287 aa)
     
   
  0.533
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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