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Solyc06g011280.2.1 Solyc06g011280.2.1 Solyc11g028100.1.1 Solyc11g028100.1.1 Solyc12g014470.1.1 Solyc12g014470.1.1 Solyc06g011380.2.1 Solyc06g011380.2.1 Solyc11g013390.1.1 Solyc11g013390.1.1 Solyc06g011400.2.1 Solyc06g011400.2.1 Solyc12g088890.1.1 Solyc12g088890.1.1 Solyc10g081240.1.1 Solyc10g081240.1.1 Solyc07g043560.2.1 Solyc07g043560.2.1 Solyc07g064930.2.1 Solyc07g064930.2.1 Solyc03g119700.2.1 Solyc03g119700.2.1
"Solyc06g011400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g011400.2.1Uncharacterized protein (529 aa)    
Predicted Functional Partners:
Solyc03g119700.2.1
Uncharacterized protein (159 aa)
   
 
  0.943
Solyc06g011380.2.1
Uncharacterized protein (205 aa)
 
          0.941
Solyc11g028100.1.1
Uncharacterized protein (414 aa)
       
 
  0.903
Solyc06g011280.2.1
Uncharacterized protein (413 aa)
       
 
  0.903
Solyc07g043560.2.1
Uncharacterized protein (890 aa)
   
 
  0.817
Solyc12g014470.1.1
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (335 aa)
   
 
  0.805
Solyc11g013390.1.1
Uncharacterized protein (190 aa)
   
 
  0.805
Solyc10g081240.1.1
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (380 aa)
   
 
  0.805
Solyc07g064930.2.1
GrpE protein homolog ; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (299 aa)
   
 
  0.805
Solyc12g088890.1.1
Uncharacterized protein (388 aa)
   
 
  0.799
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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